Intranet Tools

nb. next round of REF2013 will NOT be using data from eprints.ecs, but the central university REF interface.

RSS 1.0 Feed
RSS 2.0 Feed
Atom Feed
 

Information-Theoretic Aspects of Control in a Bio-Hybrid Robot Device

Artmann, S., Tsuda, S. and Zauner, K. P. (2008) Information-Theoretic Aspects of Control in a Bio-Hybrid Robot Device. In: Artificial Life XI: Proceedings of the Eleventh International Conference on the Simulation and Synthesis of Living Systems, pp. 33-40, MIT Press. ISBN 978-0-262-75017-2

Download

[img]
Preview
Published Version
PDF

2810Kb

Abstract

Information processing in natural systems radically differs from current information technology. This difference is particularly apparent in the area of robotics, where both organisms and artificial devices face a similar challenge: the need to act in real time in a complex environment and to do so with computing resources severely limited by their size and power consumption. The formidable gap between artificial and natural systems in terms of information processing capability motivates research into the biological modes of information processing. Such undertakings, however, are hampered by the fact that nature directly exploits the manifold physical characteristics of its computing substrates, while available theoretical tools in general ignore the underlying implementation. Here we sketch the concept of bounded computability in an attempt towards reconciling the information-theoretic perspective with the need to take the material basis of information processing into account. We do so in the context of Physarum polycephalum as a naturally evolved information processor and the use of this organism as an integral component of a robot controller.

Item Type:Book Section
Creator/Authors:
Stefan Artmann
Soichiro Tsuda
Klaus-Peter Zauner
Editors:
Seth Bullock
Jason Noble
Richard Watson
Mark Bedau
Keywords:Physarum Polycephalum, Computing Substrate, Molecular Computing, Biologically-Inspired Robotics
Research Group:Old ECS Groups > Science and Engineering of Natural Systems
Current ECS Groups > Agents, Interaction and Complexity
Alternative Locations:http://www.alifexi.org/papers/ALIFExi_pp033-040.pd...
ISBN:978-0-262-75017-2
Date:2008
Information about this record:
Performance Indicator:EZ~03~02~04
Downloads (2010):92
ID Code:16771
Last Modified:23 Sep 2011 10:37
Deposited On:08 Oct 2008 08:12 by Tsuda, Soichiro

Tools & Metadata

Download Statistics

Last month

Last year

Members of ECS may view the download statistics dashboard for this record.

References in Article

Select the SEEK icon to attempt to find the referenced article. If it does not appear to be in this archive you will be forwarded to the paracite service. Poorly formated references will probably not work.

Adamatzky, A., de Lacy Costello, B., Melluish, C., and Ratcliffe, N. (2004). Experimental implementation of mobile robot taxis with onboard Belousov-Zhabotinsky chemical medium. Materials Science & Engineering C, 24(4):541-548.

Adler, J. and Tso, W.-W. (1974). "Decision"-making in bacteria: Chemotactic response of Escherichia coli to conflicting stimuli. Science, 184:1292-1294.

Aono, M. and Hara, M. (2007). Amoeba-based nonequilibrium neurocomputer utilizing fluctuations and instability. In 6th International Conference, UC 2007, volume 4618 of LNCS, pages 41-54, Kingston, Canada. Springer.

Artmann, S. (2008). Biological information. In Sarkar, S. and Plutynski, A., editors, A Companion to the Philosophy of Biology, pages 22-39. Malden/MA: Blackwell.

Barbieri, M. (2003). Organic Codes: An Introduction to Semantic Biology. Cambridge University Press, Cambridge/England.

Braitenberg, V. (1984). Vehicles: Experiments in Synthetic Psychology. MIT Press, Cambridge, MA.

Cover, T. M. and Thomas, J. A. (2006). Elements of Information Theory. Wiley-Interscience, 2nd edition.

Gierer, A. and Meinhardt, H. (1972). Theory of biological pattern formation. Kybernetik, 12:30-39.

Hejnowicz, Z. and Wohlfarth-Bottermann, K. E. (1980). Propagated waves induced by gradients of physiological factors within plasmodia of Physarum polycephalum. Planta, 150:144-152.

Jones, G. (2006). Robotic platform for molecular controlled robots. Part III Project Report, School of Electronics and Computer Science, University of Southampton.

Macey, P. (2007). Impedance spectroscopy based interfacing with a living cell for biosensors and bio-coporcessors. Part III Project Report, School of Electronics and Computer Science, University of Southampton.

MacKay, D. (1969). Information, Mechanism and Meaning. Cambridge, MA: MIT Press.

Matsumoto, K., Ueda, T., and Kobatake, Y. (1986). Propagation of phase wave in relation to tactic responses by the plasmodium of Physarum polycephalum. Journal of Theoretical Biology, 122:339-345.

Matsumoto, K., Ueda, T., and Kobatake, Y. (1988). Reversal of thermotaxis with oscillatory stimulation in the plasmodium of Physarum polycephalum. Journal of Theoretical Biology, 131:175-182.

Miura, H. and Yano, M. (1998). A model of organization of size invariant positional information in taxis of Physarum plasmodium. Progress of Theoretical Physics, 100(2):235-251.

Miyake, Y., Tabata, S., Murakami, H., Yano, M., and Shimizu, H. (1996). Environmental-dependent self-organization of positional information field in chemotaxis of Physarum plasmodium. Journal of Theoretical Biology, 178:341-353.

Nakagaki, T., Uemura, S., Kakiuchi, Y., and Ueda, T. (1996). Action spectrum for sporulation and photoavoidance in the plasmodium of Physarum polycephalum, as modified differentially by temperature and starvation. Photochemistry and Photobiology, 64(5):859-862.

Nomura, S. (2001). Symbolization of an object and its freedom in biological systems. PhD thesis, Kobe University.

Papadimitriou, C. M. (1994). Computational complexity. Addison-Wesley, Reading, Massachusetts.

Saigusa, T., Tero, A., Nakagaki, T., and Kuramoto, Y. (2008). Amoebae anticipate periodic events. Physical Review Letters, 100(1).

Scharf, B. E., Fahrner, K. A., Turner, L., and Berg, H. C. (1998). Control of direction of flagellar rotation in bacterial chemotaxis. Proc Natl Acad Sci USA, 95(1):201-206.

Shannon, C. and Weaver, W. (1949). Mathematical Theory of Communication. University of Illinois Press.

Simon, H. (1982/1997). Models of Bounded Rationality, three volumes. MIT Press, Cambridge, Massachusetts.

Takamatsu, A., Fujii, T., and Endo, I. (2000a). Control of interaction strength in a network of the true slime mold by a microfabricated structure. BioSystems, 55:33-38.

Takamatsu, A., Fujii, T., Yokota, H., Hosokawa, K., Higuchi, T., and Endo, I. (2000b). Controlling the geometry and the coupling strength of the oscillator system in plasmodium of Physarum polycephalum by microfabricated structure. Protoplasma, 210:164-171.

Takamatsu, A., Yamamoto, T., and Fujii, T. (2004). Spontaneous switching of frequency-locking by periodic stimulus in oscillators of plasmodium of the true slime mold. BioSystems, 76:133-140.

Tanaka, H., Yoshimura, H., Miyake, Y., Imaizumi, J., Nagayama, K., and Shimizu, H. (1987). Information processing of Physarum polycephalum studied by micro-thermography. Protoplasma, 138:98-104.

Tsuda, S., Aono, M., and Gunji, Y.-P. (2004). Robust and emergent Physarum logical-computing. BioSystems, 73:45-55.

Tsuda, S., Zauner, K.-P., and Gunji, Y.-P. (2006a). Computing substrates and life. In Artmann, S. and Dittrich, P., editors, Explorations in the Complexity of Possible Life: Abstracting and Synthesizing the Principles of Living Systems, Proceedings of the 7th German Workshop on Artificial Life, pages 39-49, Jena, Germany. IOS Press.

Tsuda, S., Zauner, K.-P., and Gunji, Y.-P. (2006b). Robot control: From silicon circuitry to cells. In Ijspeert, A. J., Masuzawa, T., and Kusumoto, S., editors, BioADIT 2006, volume 3853 of Lecture Notes in Computer Science, pages 20-32. Springer.

Tsuda, S., Zauner, K.-P., and Gunji, Y.-P. (2007). Robot control with biological cells. BioSystems, 87:215-223.

Wohlfarth-Bottermann, K. E. (1979). Oscillatory contraction activity in physarum. The Journal of Experimental Biology, 81:15-32.

Zauner, K.-P. (2005). Molecular information technology. Critical Reviews in Solid State and Material Sciences, 30(1):33-69.

Corrections

ECS staff and postgraduates may modify this record

  Welcome from Deputy Head of School (Research) Research Prospectus Industrial Partnerships New Research Students Notes for Guidance New Research Students Notes for Guidance
The ECS EPrints Repository supports OAI 2.0 with a base URL of http://eprints.ecs.soton.ac.uk/cgi/oai2

EPrints is free software developed by the University of Southampton to facilitate Open Access to research.
EPrints